PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DPF9Q
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 471aa    MW: 53247.5 Da    PI: 7.5523
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DPF9QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.65.2e-07337384448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E  +lvd++ ++G g+W+ I r        Rt+ +++++w+++l
      Aradu.DPF9Q 337 WTLSEVIKLVDGISEYGVGRWTDIKRFSFsssSYRTPIDLRDKWRNLL 384
                      **************************99999*99************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.4E-11327388IPR009057Homeodomain-like
PROSITE profilePS5129412.971329388IPR017930Myb domain
SMARTSM007172.5E-7333386IPR001005SANT/Myb domain
CDDcd116601.83E-15335385No hitNo description
SuperFamilySSF466892.32E-15335400IPR009057Homeodomain-like
PfamPF139214.8E-5337400No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MDQDEKLRKC SNMKCQRVQV DESSVPALKD EAMEVDHFLA ENRNEHVSVD GGLDIHAAFN  60
GKDDLEMEVL DGFLDDVEID DLEGTDVFSG ACEEVFFDFE FDSKAEVLGP GPCEGSLLQN  120
STSESHSSEL SGSSIVGWVS ESTKLPIAQS ECKNNPLDDV VSYQSRGAFR NNPHQPANED  180
CLYNISLDIP HLHQLNNDHH LAGGILYCKR ETGSIEKSQP TALKEKRFRK PTLRYIEETS  240
NSRSKEKVPT AGTKRKHSSA SSCDELHIRI KALRKIRVEK SSNGISDVTI PKLKAHRGRP  300
KKEKLDDEEA FSLDSEDECL TPKRSKKKDR RKHQRMWTLS EVIKLVDGIS EYGVGRWTDI  360
KRFSFSSSSY RTPIDLRDKW RNLLRASSIQ TNTIDQKEDD QNDDHTLRPL PFNVACRVRE  420
LAKIHPYPRQ RGGSKNSRGS KLGTSTSVSQ SKDSPPIGQS KRNIRRKCTY K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1322330KRSKKKDRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951581.10.0PREDICTED: uncharacterized protein LOC107476294
TrEMBLV7BFL50.0V7BFL5_PHAVU; Uncharacterized protein
STRINGGLYMA13G20760.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47162639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.26e-24TRF-like 6